中老缅边境蚊虫标本中Nam Dinh病毒的分离和鉴定Isolation and Identification of the Nam Dinh Virus from Mosquitoes on the China-Laos-Myanmar Border
雷雯雯,郭晓芳,付士红,冯云,宋敬东,周红宁,梁国栋
摘要(Abstract):
2012年在云南省南部中老缅边境地区采集的库蚊中分离到3株病毒(YN12039、YN12040、YN12060),该病毒只引起C6/36细胞发生病变。负染电镜观察病毒颗粒呈球形,直径60~80nm,有囊膜,表面有刺突。采用RTPCR方法对分离株的RNA依赖的RNA聚合酶(RNA-dependent RNA-polymerase,RdRp)、HEL1(superfamily 1helicase)、S蛋白(spike protein)基因进行扩增,同源性分析显示3株云南新分离株与Nam Dinh病毒(NDiV)RdRp、HEL1、S蛋白氨基酸序列相似度最高,均为98%以上。系统进化分析结果表明,3株云南新分离株与NDiV的亲缘关系最近,处于同一进化分支。该研究结果丰富了NDiV病毒的信息,对NDiV病毒分子特征、分布区域和物种嗜性等特征提供了数据参考。
关键词(KeyWords): Nam Dinh病毒;RNA依赖的RNA聚合酶(RdRp);HEL1基因;S基因
基金项目(Foundation): 国家自然科学基金(项目号:81290342),题目:蚊虫携带人类病原体的发现与分离鉴定、分布特点、遗传进化规律及其与人类疾病的关系;; 传染病预防控制国家重点实验室项目(项目号:2014SKLID103),题目:我国新分离双链RNA病毒全基因组遗传进化特征研究;; 国家重点研发计划(项目号:2016YFD0500300),题目:重大突发动物源性人兽共患病跨种感染与传播机制研究
作者(Author): 雷雯雯,郭晓芳,付士红,冯云,宋敬东,周红宁,梁国栋
DOI: 10.13242/j.cnki.bingduxuebao.003077
参考文献(References):
- [1]Zirkel F,Kurth A,Quan P L,Briese T,Ellerbrok H,Pauli G,Leendertz F H,Lipkin W I,Ziebuhr J,Drosten C,Junglen S.An insect nidovirus emerging from a primary tropical rainforest[J/OL].MBio,2011,2:e00077-11.
- [2]Nga P T,Parquet Mdel C,Lauber C,Parida M,Nabeshima T,Yu F,Thuy N T,Inoue S,Ito T,Okamoto K,Ichinose A,Snijder E J,Morita K,Gorbalenya AE.Discovery of the first insect nidovirus,a missing evolutionary link in the emergence of the largest RNA virus genomes[J].PLoS Pathog,2011,7:e1002215.
- [3]Lauber C,Ziebuhr J,Junglen S,Drosten C,Zirkel F,Nga P T,Morita K,Snijder E J,Gorbalenya A E.Mesoniviridae:aproposed new family in the order Nidovirales formed by a single species of mosquito-borne viruses[J].Arch Virol,2012,157(8):1623-1628.
- [4]Kuwata R,Satho T,Isawa H,Yen N T,Phong T V,Nga P T,Kurashige T,Hiramatsu Y,Fukumitsu Y,Hoshino K,Sasaki T,Kobayashi M,Mizutani T,Sawabe K.Characterization of DakNong virus,an insect nidovirus isolated from Culex mosquitoes in Vietnam[J].Arch Virol,2013,158:2273-2284.
- [5]Zirkel F,Roth H,Kurth A,Drosten C,Ziebuhr J,Junglen S.Identification and characterization of genetically divergent members of the newly established family Mesoniviridae[J].J Virol,2013,87(11):6346-6358.
- [6]Nga P T,Thuy N T,Morita K,Claude J,Mannuguerra.Emerging viruses associated with acute encephalitis syndrome in Vietnam[A].Scientific Conference of the Institut Pasteur International Network:emerging and re-emerging viral infectious[C].National Institute of Hygiene and Epidemiology Hanoi,2006.
- [7]刘渠,林琳,周健明,陈应坚,张起文,王德全,李静媚,金玉娟.中国国内首次发现Nam Dinh病毒[J].病毒学报,2013,29(1):1-6.
- [8]赵秋敏,郭晓芳,曾旭灿,周红宁,张久松.云南省Nam Dinh病毒的首次鉴定[J].寄生虫与医学昆虫学报,2016,23(2):91-97.
- [9]Gorbalenya A E,Enjuanes L,Ziebuhr J,Snijder E J.Nidovirales:evolving the largest RNA virus genome[J].Virus Res,2006,117(1):17-37.
- [10]Koonin E V.The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses[J].J Gen Virol,1991,72:2197-2206.
- [11]WilsonJ A,Jayasena S,Khvorova A,Sabatinos S,Rodrigue-GervaisI G,Arya S,Sarangi F,Harris-Brandts M,Beaulieu S,Richardson C D.RNA interference blocks gene expression and RNA synthesis from hepatitis C replicons propagated in human liver cells[J].PNAS,2003,100(5):2783-2788.
- [12]Wang L,Junker D,Collisson E W.Evidence of natural recombination within the S1gens of infectious bronchitis virus[J].Virology,1993,192:710-716.
- [13]Jia W,Karaca K,Parrish C R,Naqi S A.A novel variant of avian infectious bronchitis virus resulting from recombination among three different strains[J].Arch Virol,1995,140:259-271.