nav emailalert searchbtn searchbox tablepage yinyongbenwen piczone journalimg journalInfo journalinfonormal searchdiv searchzone qikanlogo popupnotification paper paperNew
2025, 05, v.41 1367-1375
北京市丰台区人偏肺病毒聚集性发热疫情的基因特征分析
基金项目(Foundation): 北京重大呼吸道传染病研究中心项目(BJRID2025-005),新发呼吸道传染病流行时不同阶段防控策略研究~~
邮箱(Email): zy3566327@126.com;
DOI: 10.13242/j.cnki.bingduxuebao.250210
摘要:

对2024年北京市丰台区发生的聚集性发热疫情进行病原鉴定,分析人偏肺病毒(Human metapneumovirus,HMPV)的基因特征,提升我区发热疫情处置能力。收集北京市丰台区聚集性发热疫情的流行病学信息和咽拭子标本,提取核酸后使用实时荧光聚合酶链式反应(PCR)进行常见呼吸道病原体的筛查。筛查为HMPV核酸阳性的标本,采用巢式逆转录-聚合酶链式反应(RT-PCR)扩增HMPV F蛋白和G蛋白的核苷酸序列,使用BioEdit及Mega7软件对序列进行分析。144起聚集性发热疫情的594份咽拭子标本中,有8起共27份标本经检测为HMPV阳性,阳性率为4.55%(27/594)。HMPV聚集性发热疫情主要发生在12月份。获得的F蛋白和G蛋白基因序列分型均为B2型。与B2参考株CAN98-75相比,20份本土株F蛋白在第280位点均发生了D(天冬氨酸)→N(天冬酰胺)的变异;8份本土株G蛋白均存在糖基化位点的改变或数量的减少。2024年北京市丰台区发生的HMPV聚集性疫情的基因型均为B2型,有必要加强HMPV的长期监测。

Abstract:

An outbreak investigation was conducted in Fengtai District, Beijing, in 2024 to identify the causative pathogen of clustered fever cases and to analyze the genetic characteristics of human metapneumovirus(HMPV). Epidemiological data and throat swab specimens were collected, and nucleic acids were extracted and screened for common respiratory pathogens using real-time fluorescent polymerase chain reaction(PCR). HMPV-positive specimens were further analyzed by nested reverse transcription-PCR(RT-PCR) to amplify the F and G protein genes, followed by sequence analysis using BioEdit and MEGA 7 software. Among 594 throat swab specimens from 144 outbreaks, 27 specimens from 8 outbreaks tested positive for HMPV, with a positivity rate of 4.55%(27/594). These outbreaks occurred predominantly in December. Phylogenetic analysis showed that all F and G protein gene sequences belonged to genotype B2. Compared with the B2 reference strain CAN98-75, 20 local strains had a D(aspartic acid) to N(asparagine) substitution at position 280 in the F protein, and 8 strains showed alterations or reductions in glycosylation sites of the G protein. The 2024 HMPV outbreaks in Fengtai District were exclusively caused by genotype B2 strains, highlighting the need for sustained long-term surveillance to support timely detection and control of HMPV outbreaks.

参考文献

[1] Amarasinghe GK, Bào Y, Basler CF, et al. Taxonomy of the order mononegavirales:update 2017[J].Arch Virol, 2017, 162(8):2493-2504.DOI:10.1007/s00705-017-3311-7.

[2] Jagusic M, Slovic A, Ivancic-Jelecki J, et al. Molecular epidemiology of human respiratory syncytial virus and human metapneumovirus in hospitalized children with acute respiratory infections in Croatia, 2014-2017[J].Infect Genet Evol, 2019, 76:104039.DOI:10.1016/j.meegid.2019.104039.

[3] Divarathna MVM, Rafeek RAM, Noordeen F.A review on epidemiology and impact of human metapneumovirus infections in children using TIAB search strategy on PubMed and PubMed Central articles[J].Rev Med Virol, 2020, 30(1):e2090.DOI:10.1002/rmv.2090.

[4]麻粉连,郑丽舒.人偏肺病毒感染研究进展[J].病毒学报,2024, 40(01):133-139.DOI:10.13242/j.cnki.bingduxuebao.004438.

[5] Huck B, Scharf G, Neumann-Haefelin D, et al. Novel human metapneumovirus sublineage[J].Emerg Infect Dis, 2006, 12(1):147-150.DOI:10.3201/eid1201.050772.

[6] Biacchesi S, Skiadopoulos MH, Boivin G, et al. Genetic diversity between human metapneumovirus subgroups[J].Virology, 2003, 315(1):1-9.DOI:10.1016/S0042-6822(03)00528-2.

[7]段玮,刘医萌,赵佳琛,等.新型冠状病毒感染疫情常态化防控期间一起聚集性发热疫情的病原鉴定与溯源分析[J].中国病毒病杂志,2023, 13(2):120-125.DOI:10.16505/j.2095-0136.2023.2007.

[8]王昕,房师松,武伟华,等.深圳市2017—2023年幼儿园和学校人偏肺病毒聚集性疫情分析[J].中国学校卫生,2024, 45(12):1789-1791, 1797.DOI:10.16835/j.cnki.1000-9817.2024356.

[9]宋泰霞,岳勇.成都市某幼儿园一起人类偏肺病毒感染聚集性疫情调查分析[J].中国初级卫生保健,2024, 38(2):67-69.DOI:10.3969/j.issn.1001-568X.2024.02.0019.

[10]凌良健,蒋霞,许云霞.常州市一起人偏肺病毒感染聚集性疫情调查[J].江苏卫生保健,2024, 26(5):379-381.

[11]Yi L, Zou L, Peng J, et al. Epidemiology, evolution and transmission of human metapneumovirus in Guangzhou China, 2013-2017[J].Sci Rep, 2019, 9(1):14022.DOI:10.1038/s41598-019-50340-8.

[12]Panda S, Mohakud NK, Pena L, et al. Human metapneumovirus:review of an important respiratory pathogen[J].Int J Infect Dis, 2014, 25:45-52.DOI:10.1016/j.ijid.2014.03.1394.

[13]Naz R, Gul A, Javed U, et al. Etiology of acute viral respiratory infections common in Pakistan:a review[J].Rev Med Virol, 2019, 29(2):e2024.DOI:10.1002/rmv.2024.

[14]van den Hoogen BG, de Jong JC, Groen J, et al. A newly discovered human pneumovirus isolated from young children with respiratory tract disease[J].Nat Med, 2001, 7(6):719-724.DOI:10.1038/89098.

[15]Li ZJ, Zhang HY, Ren LL, et al. Etiological and epidemiological features of acute respiratory infections in China[J].Nat Commun, 2021, 12(1):5026.DOI:10.1038/s41467-021-25120-6.

[16]崔爱利,谢智博,余鹏博,等.2009年至2021年我国9省份发热呼吸道症候群病例中人偏肺病毒感染情况及流行特征分析[J].中华实用儿科临床杂志,2021, 36(24):1861-1865.DOI:10.3760/cma.j.cn101070-20210908-01095.

[17]李蕊,郭丽茹,孔梅,等.天津市儿童中人偏肺病毒的流行病学及分子特征分析[J].中华微生物学和免疫学杂志,2024, 44(07):588-595.DOI:10.3760/cma.j.cn112309-20240318-00100.

[18]龚成,石伟先,崔淑娟,等.2011--2013年北京市急性呼吸道感染病例人偏肺病毒流行状况分析[J].中华流行病学杂志,2014, 35(2):219-220.DOI:10.3760/cma.j.issn.0254-6450.2014.02.028.

[19]卢桂兰,刘医萌,崔淑娟,等.北京地区2015年11至12月人呼吸道合胞病毒与人偏肺病毒感染及遗传特征研究[J].中国病毒病杂志,2016, 6(6):459-466.DOI:10.16505/j.2095-0136.2016.06.008.

[20]王海滨,雷娜,马建新,等.北京市朝阳区流感样病例病原谱及人偏肺病毒感染情况[J].首都公共卫生,2020, 14(5):259-261.DOI:10.3760/cma.j.cn112338-20240828-00001.

[21]Cong S, Wang C, Wei T, et al. Human metapneumovirus in hospitalized children with acute respiratory tract infections in Beijing, China[J].Infect Genet Evol, 2022, 106:105386.DOI:10.1016/j.meegid.2022.105386.

[22]Garrett Rappazzo C, Hsieh CL, Rush SA, et al. Potently neutralizing and protective anti-human metapneumovirus antibodies target diverse sites on the fusion glycoprotein[J].Immunity, 2022, 55(9):1710-1724.e8.DOI:10.1016/j.immuni.2022.07.003.2022.

[23] van den Hoogen BG, Herfst S, Sprong L, et al. Antigenic and genetic variability of human metapneumoviruses[J].Emerg Infect Dis, 2004, 10(4):658-666.DOI:10.3201/eid1004.030393.

[24] Piyaratna R, Tollefson SJ, Williams JV.Genomic analysis of four human metapneumovirus prototypes[J].Virus Res, 2011, 160(1-2):200-205.DOI:10.1016/j.virusres.2011.06.014.

[25] Agrawal AS, Roy T, Ghosh S, et al. Genetic variability of attachment(G)and Fusion(F)protein genes of human metapneumovirus strains circulating during 2006-2009 in Kolkata, Eastern India[J].Virol J,2011, 8:67.DOI:10.1186/1743-422X-8-67.

[26]麻粉莲,王超,陈爱珺,等.人偏肺病毒在传代细胞和人呼吸道上皮细胞中分离和鉴定[J].病毒学报,2022, 38(02):313-321.DOI:10.13242/j.cnki.bingduxuebao.004103.

[27]郑诗源,黄益曼,孟小草,等.人偏肺病毒假病毒阳性标准品的制备与鉴定[J].病毒学报,2024, 40(06):1263-1273.DOI:10.13242/j.cnki.bingduxuebao.004615.

基本信息:

DOI:10.13242/j.cnki.bingduxuebao.250210

中图分类号:R181.8

引用信息:

[1]秦萌,颜涛,王超,等.北京市丰台区人偏肺病毒聚集性发热疫情的基因特征分析[J].病毒学报,2025,41(05):1367-1375.DOI:10.13242/j.cnki.bingduxuebao.250210.

基金信息:

北京重大呼吸道传染病研究中心项目(BJRID2025-005),新发呼吸道传染病流行时不同阶段防控策略研究~~

检 索 高级检索

引用

GB/T 7714-2015 格式引文
MLA格式引文
APA格式引文